Please click here: PubMed to access the full PubMed publications
2024
Lin, Grace C; Tevini, Julia; Mair, Lisa; Friedl, Heinz-Peter; Fuchs, Dietmar; Felder, Thomas; Gostner, Johanna M; Neuhaus, Winfried
Investigations towards tryptophan uptake and transport across an in vitro model of the oral mucosa epithelium Journal Article
In: Int. J. Tryptophan Res., vol. 17, pp. 11786469241266312, 2024.
@article{Lin2024-pt,
title = {Investigations towards tryptophan uptake and transport across an
in vitro model of the oral mucosa epithelium},
author = {Grace C Lin and Julia Tevini and Lisa Mair and Heinz-Peter Friedl and Dietmar Fuchs and Thomas Felder and Johanna M Gostner and Winfried Neuhaus},
year = {2024},
date = {2024-07-01},
journal = {Int. J. Tryptophan Res.},
volume = {17},
pages = {11786469241266312},
publisher = {SAGE Publications},
abstract = {Tryptophan is an essential amino acid and plays an important
role in several metabolic processes relevant for the human
health. As the main metabolic pathway for tryptophan along the
kynurenine axis is involved in inflammatory responses, changed
metabolite levels can be used to monitor inflammatory diseases
such as ulcerative colitis. As a progenitor of serotonin,
altered tryptophan levels have been related to several
neurogenerative diseases as well as depression or anxiety. While
tryptophan concentrations are commonly evaluated in serum, a
non-invasive detection approach using saliva might offer
significant advantages, especially during long-term treatments
of patients or elderly. In order to estimate whether active
transport processes for tryptophan might contribute to a
potential correlation between blood and saliva tryptophan
concentrations, we investigated tryptophan's transport across an
established oral mucosa in vitro model. Interestingly, treatment
with tryptophan revealed a concentration dependent secretion of
tryptophan and the presence of a saturable transporter while
transport studies with deuterated tryptophan displayed increased
permeability from the saliva to the blood compartment. Protein
analysis demonstrated a distinct expression of L-type amino acid
transporter 1 (LAT1), the major transporter for tryptophan, and
exposure to inhibitors (2 -amino-2-norbornanecarboxylic acid
(BCH), L-leucine) led to increased tryptophan levels on the
saliva side. Additionally, exposure to tryptophan in equilibrium
studies resulted in a regulation of LAT1 at the mRNA level. The
data collected in this study suggest the participation of active
transport mechanisms for tryptophan across the oral mucosa
epithelium. Future studies should investigate the transport of
tryptophan across salivary gland epithelia in order to enable a
comprehensive understanding of tryptophan exchange at the
blood-saliva barrier.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
role in several metabolic processes relevant for the human
health. As the main metabolic pathway for tryptophan along the
kynurenine axis is involved in inflammatory responses, changed
metabolite levels can be used to monitor inflammatory diseases
such as ulcerative colitis. As a progenitor of serotonin,
altered tryptophan levels have been related to several
neurogenerative diseases as well as depression or anxiety. While
tryptophan concentrations are commonly evaluated in serum, a
non-invasive detection approach using saliva might offer
significant advantages, especially during long-term treatments
of patients or elderly. In order to estimate whether active
transport processes for tryptophan might contribute to a
potential correlation between blood and saliva tryptophan
concentrations, we investigated tryptophan's transport across an
established oral mucosa in vitro model. Interestingly, treatment
with tryptophan revealed a concentration dependent secretion of
tryptophan and the presence of a saturable transporter while
transport studies with deuterated tryptophan displayed increased
permeability from the saliva to the blood compartment. Protein
analysis demonstrated a distinct expression of L-type amino acid
transporter 1 (LAT1), the major transporter for tryptophan, and
exposure to inhibitors (2 -amino-2-norbornanecarboxylic acid
(BCH), L-leucine) led to increased tryptophan levels on the
saliva side. Additionally, exposure to tryptophan in equilibrium
studies resulted in a regulation of LAT1 at the mRNA level. The
data collected in this study suggest the participation of active
transport mechanisms for tryptophan across the oral mucosa
epithelium. Future studies should investigate the transport of
tryptophan across salivary gland epithelia in order to enable a
comprehensive understanding of tryptophan exchange at the
blood-saliva barrier.
Hargitai, Rita; Parráková, Lucia; Szatmári, Tünde; Monfort-Lanzas, Pablo; Galbiati, Valentina; Audouze, Karine; Jornod, Florence; Staal, Yvonne C M; Burla, Sabina; Chary, Aline; Gutleb, Arno C; Lumniczky, Katalin; Vandebriel, Rob J; Gostner, Johanna M
Chemical respiratory sensitization-Current status of mechanistic understanding, knowledge gaps and possible identification methods of sensitizers Journal Article
In: Front. Toxicol., vol. 6, pp. 1331803, 2024.
@article{Hargitai2024-fp,
title = {Chemical respiratory sensitization-Current status of mechanistic
understanding, knowledge gaps and possible identification
methods of sensitizers},
author = {Rita Hargitai and Lucia Parráková and Tünde Szatmári and Pablo Monfort-Lanzas and Valentina Galbiati and Karine Audouze and Florence Jornod and Yvonne C M Staal and Sabina Burla and Aline Chary and Arno C Gutleb and Katalin Lumniczky and Rob J Vandebriel and Johanna M Gostner},
year = {2024},
date = {2024-07-01},
journal = {Front. Toxicol.},
volume = {6},
pages = {1331803},
publisher = {Frontiers Media SA},
abstract = {Respiratory sensitization is a complex immunological process
eventually leading to hypersensitivity following re-exposure to
the chemical. A frequent consequence is occupational asthma,
which may occur after long latency periods. Although
chemical-induced respiratory hypersensitivity has been known for
decades, there are currently no comprehensive and validated
approaches available for the prospective identification of
chemicals that induce respiratory sensitization, while the
expectations of new approach methodologies (NAMs) are high. A
great hope is that due to a better understanding of the
molecular key events, new methods can be developed now. However,
this is a big challenge due to the different chemical classes to
which respiratory sensitizers belong, as well as because of the
complexity of the response and the late manifestation of
symptoms. In this review article, the current information on
respiratory sensitization related processes is summarized by
introducing it in the available adverse outcome pathway (AOP)
concept. Potentially useful models for prediction are discussed.
Knowledge gaps and gaps of regulatory concern are identified.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
eventually leading to hypersensitivity following re-exposure to
the chemical. A frequent consequence is occupational asthma,
which may occur after long latency periods. Although
chemical-induced respiratory hypersensitivity has been known for
decades, there are currently no comprehensive and validated
approaches available for the prospective identification of
chemicals that induce respiratory sensitization, while the
expectations of new approach methodologies (NAMs) are high. A
great hope is that due to a better understanding of the
molecular key events, new methods can be developed now. However,
this is a big challenge due to the different chemical classes to
which respiratory sensitizers belong, as well as because of the
complexity of the response and the late manifestation of
symptoms. In this review article, the current information on
respiratory sensitization related processes is summarized by
introducing it in the available adverse outcome pathway (AOP)
concept. Potentially useful models for prediction are discussed.
Knowledge gaps and gaps of regulatory concern are identified.
Monfort-Lanzas, Pablo; Rusu, Elena Cristina; Parrakova, Lucia; Karg, Cornelia A; Kernbichler, Dorina-Elina; Rieder, Dietmar; Lackner, Peter; Hackl, Hubert; Gostner, Johanna M
ExonSurfer: a web-tool to design primers at exon-exon junctions Journal Article
In: BMC Genomics, vol. 25, no. 1, pp. 594, 2024.
@article{Monfort-Lanzas2024-bw,
title = {ExonSurfer: a web-tool to design primers at exon-exon
junctions},
author = {Pablo Monfort-Lanzas and Elena Cristina Rusu and Lucia Parrakova and Cornelia A Karg and Dorina-Elina Kernbichler and Dietmar Rieder and Peter Lackner and Hubert Hackl and Johanna M Gostner},
year = {2024},
date = {2024-06-01},
journal = {BMC Genomics},
volume = {25},
number = {1},
pages = {594},
publisher = {Springer Science and Business Media LLC},
abstract = {BACKGROUND: Reverse transcription quantitative PCR (RT-qPCR)
with intercalating dyes is one of the main techniques to assess
gene expression levels used in basic and applied research as
well as in diagnostics. However, primer design for RT-qPCR can
be complex due to the high demands on primer quality. Primers
are best placed on exon junctions, should avoid polymorphic
regions, be specific to the target transcripts and also prevent
genomic amplification accurately, among others. Current software
tools manage to meet all the necessary criteria only
insufficiently. Here, we present ExonSurfer, a novel,
user-friendly web-tool for qPCR primer design. RESULTS:
ExonSurfer combines the different steps of the primer design
process, encompassing target selection, specificity and
self-complementarity assessment, and the avoidance of issues
arising from polymorphisms. Amplification of potentially
contaminating genomic DNA is avoided by designing primers on
exon-exon junctions, moreover, a genomic alignment is performed
to filter the primers accordingly and inform the user of any
predicted interaction. In order to test the whole performance of
the application, we designed primer pairs for 26 targets and
checked both primer efficiency, amplicon melting temperature and
length and confirmed the targeted amplicon by Sanger sequencing.
Most of the tested primers accurately and selectively amplified
the corresponding targets. CONCLUSION: ExonSurfer offers a
comprehensive end-to-end primer design, guaranteeing
transcript-specific amplification. The user interface is
intuitive, providing essential specificity and amplicon details.
The tool can also be used by command line and the source code is
available. Overall, we expect ExonSurfer to facilitate RT-qPCR
set-up for researchers in many fields.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
with intercalating dyes is one of the main techniques to assess
gene expression levels used in basic and applied research as
well as in diagnostics. However, primer design for RT-qPCR can
be complex due to the high demands on primer quality. Primers
are best placed on exon junctions, should avoid polymorphic
regions, be specific to the target transcripts and also prevent
genomic amplification accurately, among others. Current software
tools manage to meet all the necessary criteria only
insufficiently. Here, we present ExonSurfer, a novel,
user-friendly web-tool for qPCR primer design. RESULTS:
ExonSurfer combines the different steps of the primer design
process, encompassing target selection, specificity and
self-complementarity assessment, and the avoidance of issues
arising from polymorphisms. Amplification of potentially
contaminating genomic DNA is avoided by designing primers on
exon-exon junctions, moreover, a genomic alignment is performed
to filter the primers accordingly and inform the user of any
predicted interaction. In order to test the whole performance of
the application, we designed primer pairs for 26 targets and
checked both primer efficiency, amplicon melting temperature and
length and confirmed the targeted amplicon by Sanger sequencing.
Most of the tested primers accurately and selectively amplified
the corresponding targets. CONCLUSION: ExonSurfer offers a
comprehensive end-to-end primer design, guaranteeing
transcript-specific amplification. The user interface is
intuitive, providing essential specificity and amplicon details.
The tool can also be used by command line and the source code is
available. Overall, we expect ExonSurfer to facilitate RT-qPCR
set-up for researchers in many fields.
Wagner, Katharina Konstanze Lilly; Corda, Daniele; Steinmayr, Andreas; Burkert, Francesco; Fuchs, Dietmar; Gostner, Johanna; Hofer, Stefanie; Parrakova, Lucia; Gasslitter, Irina; Weiss, Günter; Irsara, Christian; Maier, Sarah; Griesmacher, Andrea; Bellmann-Weiler, Rosa; Kurz, Katharina
CRP/Neopterin ratio and neuropsychiatric symptoms in patients with different forms of pneumonia: Results of a pilot study Journal Article
In: Microorganisms, vol. 12, no. 6, pp. 1099, 2024.
@article{Wagner2024-be,
title = {CRP/Neopterin ratio and neuropsychiatric symptoms in patients
with different forms of pneumonia: Results of a pilot study},
author = {Katharina Konstanze Lilly Wagner and Daniele Corda and Andreas Steinmayr and Francesco Burkert and Dietmar Fuchs and Johanna Gostner and Stefanie Hofer and Lucia Parrakova and Irina Gasslitter and Günter Weiss and Christian Irsara and Sarah Maier and Andrea Griesmacher and Rosa Bellmann-Weiler and Katharina Kurz},
year = {2024},
date = {2024-05-01},
journal = {Microorganisms},
volume = {12},
number = {6},
pages = {1099},
publisher = {MDPI AG},
abstract = {BACKGROUND: Pneumonia is one of the most common infectious
diseases, mostly caused by viruses or bacteria. In response to
bacteria or viruses which are different but which also are
partly overlapping, innate and adaptive immune responses are
induced, which can be quantified using the determination of
specific biomarkers. Among these, C-reactive protein (CRP) has
been established as a marker of innate immune function, whereas
Neopterin, which is mainly produced upon stimulation with
interferon-gamma, reflects cellular immune activation. AIM: We
investigated inflammation markers in patients with
microbiologically confirmed viral or bacterial pneumonia, and
studied the potential of CRP, Neopterin, and the CRP/Neopterin
ratio to distinguish between viral and bacterial pathogenesis.
Furthermore, we examined, how often neuropsychiatric symptoms
occur in patients suffering from different kinds of pneumonia.
PATIENTS AND METHOD: A total of 194 patients diagnosed with either coronavirus disease 2019 (COVID-19) (n = 63), bacterial pneumonia (n = 58), Influenza infection (n = 10), Influenza and a bacterial superinfection (n = 9), and COVID-19 patients with a bacterial superinfection (n = 54) were included in our pilot
study. Clinical as well as laboratory parameters were determined
shortly after admission. RESULTS: We found significantly higher
CRP/Neopterin ratios in patients with bacterial pneumonia
(median: 0.34) and lower CRP/Neopterin ratios in patients
hospitalized with COVID-19 infection (median: 0.03; p < 0.001).
Both in men and in women, the CRP/Neopterin ratio was able to
distinguish between viral and bacterial pathogens, but also was
able to detect bacterial super-infection (BSI) in subjects with
initial viral pneumonia (p < 0.001). Patients with BSI presented
with significantly lower CRP/Neopterin ratios (median 0.08) than
patients with bacterial infection only (median 0.34; p < 0.001).
Interestingly, COVID-19 patients had a decreased physical
functioning (as reflected in the ECOG score) and a higher
frequency of fatigue (84.1%) and neurological symptoms (54.8%)
than patients with pneumonia, due to other underlying pathogens.
Patients that reported fatigue during viral and bacterial
pneumonia presented with lower CRP concentrations than patients
without it. CONCLUSIONS: The CRP/Neopterin ratio is useful to
differentiate between viral and bacterial pathogenesis. The
occurrence of neuropsychiatric symptoms in pneumonia appears to
depend on the kind of pathogen causing the infection. Lower CRP
concentrations at admission appear to be related to fatigue
during acute viral and bacterial infection.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
diseases, mostly caused by viruses or bacteria. In response to
bacteria or viruses which are different but which also are
partly overlapping, innate and adaptive immune responses are
induced, which can be quantified using the determination of
specific biomarkers. Among these, C-reactive protein (CRP) has
been established as a marker of innate immune function, whereas
Neopterin, which is mainly produced upon stimulation with
interferon-gamma, reflects cellular immune activation. AIM: We
investigated inflammation markers in patients with
microbiologically confirmed viral or bacterial pneumonia, and
studied the potential of CRP, Neopterin, and the CRP/Neopterin
ratio to distinguish between viral and bacterial pathogenesis.
Furthermore, we examined, how often neuropsychiatric symptoms
occur in patients suffering from different kinds of pneumonia.
PATIENTS AND METHOD: A total of 194 patients diagnosed with either coronavirus disease 2019 (COVID-19) (n = 63), bacterial pneumonia (n = 58), Influenza infection (n = 10), Influenza and a bacterial superinfection (n = 9), and COVID-19 patients with a bacterial superinfection (n = 54) were included in our pilot
study. Clinical as well as laboratory parameters were determined
shortly after admission. RESULTS: We found significantly higher
CRP/Neopterin ratios in patients with bacterial pneumonia
(median: 0.34) and lower CRP/Neopterin ratios in patients
hospitalized with COVID-19 infection (median: 0.03; p < 0.001).
Both in men and in women, the CRP/Neopterin ratio was able to
distinguish between viral and bacterial pathogens, but also was
able to detect bacterial super-infection (BSI) in subjects with
initial viral pneumonia (p < 0.001). Patients with BSI presented
with significantly lower CRP/Neopterin ratios (median 0.08) than
patients with bacterial infection only (median 0.34; p < 0.001).
Interestingly, COVID-19 patients had a decreased physical
functioning (as reflected in the ECOG score) and a higher
frequency of fatigue (84.1%) and neurological symptoms (54.8%)
than patients with pneumonia, due to other underlying pathogens.
Patients that reported fatigue during viral and bacterial
pneumonia presented with lower CRP concentrations than patients
without it. CONCLUSIONS: The CRP/Neopterin ratio is useful to
differentiate between viral and bacterial pathogenesis. The
occurrence of neuropsychiatric symptoms in pneumonia appears to
depend on the kind of pathogen causing the infection. Lower CRP
concentrations at admission appear to be related to fatigue
during acute viral and bacterial infection.
Hu, Zicheng; Cinque, Paola; Dravid, Ameet; Hagberg, Lars; Yilmaz, Aylin; Zetterberg, Henrik; Fuchs, Dietmar; Gostner, Johanna; Blennow, Kaj; Spudich, Serena S; Kincer, Laura; Zhou, Shuntai; Joseph, Sarah; Swanstrom, Ronald; Price, Richard W; Gisslén, Magnus
Changes in cerebrospinal fluid proteins across the spectrum of untreated and treated chronic HIV-1 infection Journal Article
In: bioRxivorg, 2024.
@article{Hu2024-df,
title = {Changes in cerebrospinal fluid proteins across the spectrum of
untreated and treated chronic HIV-1 infection},
author = {Zicheng Hu and Paola Cinque and Ameet Dravid and Lars Hagberg and Aylin Yilmaz and Henrik Zetterberg and Dietmar Fuchs and Johanna Gostner and Kaj Blennow and Serena S Spudich and Laura Kincer and Shuntai Zhou and Sarah Joseph and Ronald Swanstrom and Richard W Price and Magnus Gisslén},
year = {2024},
date = {2024-05-01},
journal = {bioRxivorg},
abstract = {Using the Olink Explore 1536 platform, we measured 1,463 unique
proteins in 303 cerebrospinal fluid (CSF) specimens from four
clinical centers that included uninfected controls and 12 groups
of people living with HIV-1 infection representing the spectrum
of progressive untreated and treated chronic infection. We
present three initial analyses of these measurements: an overview
of the CSF protein features of the sample; correlations of the
CSF proteins with CSF HIV-1 RNA and neurofilament light chain
protein (NfL) concentrations; and comparison of the CSF proteins
in HIV-associated dementia ( HAD ) and neurosymptomatic CSF
escape ( NSE ). These reveal a complex but coherent picture of
CSF protein changes that includes highest concentrations of many
proteins during CNS injury in the HAD and NSE groups and variable
protein changes across the course of neuroasymptomatic systemic
HIV-1 progression, including two common patterns, designated as
lymphoid and myeloid patterns, related to the principal
involvement of their underlying inflammatory cell lineages.
Antiretroviral therapy reduced CSF protein perturbations, though
not always to control levels. The dataset of these CSF protein
measurements, along with background clinical information, is
posted online. Extended studies of this unique dataset will
provide more detailed characterization of the dynamic impact of
HIV-1 infection on the CSF proteome across the spectrum of HIV-1
infection, and further the mechanistic understanding of
HIV-1-related CNS pathobiology.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
proteins in 303 cerebrospinal fluid (CSF) specimens from four
clinical centers that included uninfected controls and 12 groups
of people living with HIV-1 infection representing the spectrum
of progressive untreated and treated chronic infection. We
present three initial analyses of these measurements: an overview
of the CSF protein features of the sample; correlations of the
CSF proteins with CSF HIV-1 RNA and neurofilament light chain
protein (NfL) concentrations; and comparison of the CSF proteins
in HIV-associated dementia ( HAD ) and neurosymptomatic CSF
escape ( NSE ). These reveal a complex but coherent picture of
CSF protein changes that includes highest concentrations of many
proteins during CNS injury in the HAD and NSE groups and variable
protein changes across the course of neuroasymptomatic systemic
HIV-1 progression, including two common patterns, designated as
lymphoid and myeloid patterns, related to the principal
involvement of their underlying inflammatory cell lineages.
Antiretroviral therapy reduced CSF protein perturbations, though
not always to control levels. The dataset of these CSF protein
measurements, along with background clinical information, is
posted online. Extended studies of this unique dataset will
provide more detailed characterization of the dynamic impact of
HIV-1 infection on the CSF proteome across the spectrum of HIV-1
infection, and further the mechanistic understanding of
HIV-1-related CNS pathobiology.
Gietl, Mario; Burkert, Francesco; Hofer, Stefanie; Gostner, Johanna M; Sonnweber, Thomas; Tancevski, Ivan; Pizzini, Alex; Sahanic, Sabina; Schroll, Andrea; Brigo, Natascha; Egger, Alexander; Bellmann-Weiler, Rosa; Löffler-Ragg, Judith; Weiss, Günter; Kurz, Katharina
Laboratory parameters related to disease severity and physical performance after reconvalescence of acute COVID-19 infection Journal Article
In: Sci. Rep., vol. 14, no. 1, pp. 10388, 2024.
@article{Gietl2024-ng,
title = {Laboratory parameters related to disease severity and physical
performance after reconvalescence of acute COVID-19 infection},
author = {Mario Gietl and Francesco Burkert and Stefanie Hofer and Johanna M Gostner and Thomas Sonnweber and Ivan Tancevski and Alex Pizzini and Sabina Sahanic and Andrea Schroll and Natascha Brigo and Alexander Egger and Rosa Bellmann-Weiler and Judith Löffler-Ragg and Günter Weiss and Katharina Kurz},
year = {2024},
date = {2024-05-01},
journal = {Sci. Rep.},
volume = {14},
number = {1},
pages = {10388},
publisher = {Springer Science and Business Media LLC},
abstract = {Research into the molecular basis of disease trajectory and
Long-COVID is important to get insights toward underlying
pathophysiological processes. The objective of this study was to
investigate inflammation-mediated changes of metabolism in
patients with acute COVID-19 infection and throughout a one-year
follow up period. The study enrolled 34 patients with moderate
to severe COVID-19 infection admitted to the University Clinic
of Innsbruck in early 2020. The dynamics of multiple laboratory
parameters (including inflammatory markers [C-reactive protein
(CRP), interleukin-6 (IL-6), neopterin] as well as amino acids
[tryptophan (Trp), phenylalanine (Phe) and tyrosine (Tyr)], and
parameters of iron and vitamin B metabolism) was related to
disease severity and patients' physical performance. Also,
symptom load during acute illness and at approximately 60 days
(FU1), and one year after symptom onset (FU2) were monitored and
related with changes of the investigated laboratory parameters:
During acute infection many investigated laboratory parameters
were elevated (e.g., inflammatory markers, ferritin, kynurenine,
phenylalanine) and enhanced tryptophan catabolism and
phenylalanine accumulation were found. At FU2 nearly all
laboratory markers had declined back to reference ranges.
However, kynurenine/tryptophan ratio (Kyn/Trp) and the
phenylalanine/tyrosine ratio (Phe/Tyr) were still exceeding the
95th percentile of healthy controls in about two thirds of our
cohort at FU2. Lower tryptophan concentrations were associated
with B vitamin availability (during acute infection and at FU1),
patients with lower vitamin B12 levels at FU1 had a prolonged
and more severe impairment of their physical functioning
ability. Patients who had fully recovered (ECOG 0) presented
with higher concentrations of iron parameters (ferritin,
hepcidin, transferrin) and amino acids (phenylalanine, tyrosine)
at FU2 compared to patients with restricted ability to work.
Persistent symptoms at FU2 were tendentially associated with
IFN-γ related parameters. Women were affected by
long-term symptoms more frequently. Conclusively,
inflammation-mediated biochemical changes appear to be related
to symptoms of patients with acute and Long Covid.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
Long-COVID is important to get insights toward underlying
pathophysiological processes. The objective of this study was to
investigate inflammation-mediated changes of metabolism in
patients with acute COVID-19 infection and throughout a one-year
follow up period. The study enrolled 34 patients with moderate
to severe COVID-19 infection admitted to the University Clinic
of Innsbruck in early 2020. The dynamics of multiple laboratory
parameters (including inflammatory markers [C-reactive protein
(CRP), interleukin-6 (IL-6), neopterin] as well as amino acids
[tryptophan (Trp), phenylalanine (Phe) and tyrosine (Tyr)], and
parameters of iron and vitamin B metabolism) was related to
disease severity and patients' physical performance. Also,
symptom load during acute illness and at approximately 60 days
(FU1), and one year after symptom onset (FU2) were monitored and
related with changes of the investigated laboratory parameters:
During acute infection many investigated laboratory parameters
were elevated (e.g., inflammatory markers, ferritin, kynurenine,
phenylalanine) and enhanced tryptophan catabolism and
phenylalanine accumulation were found. At FU2 nearly all
laboratory markers had declined back to reference ranges.
However, kynurenine/tryptophan ratio (Kyn/Trp) and the
phenylalanine/tyrosine ratio (Phe/Tyr) were still exceeding the
95th percentile of healthy controls in about two thirds of our
cohort at FU2. Lower tryptophan concentrations were associated
with B vitamin availability (during acute infection and at FU1),
patients with lower vitamin B12 levels at FU1 had a prolonged
and more severe impairment of their physical functioning
ability. Patients who had fully recovered (ECOG 0) presented
with higher concentrations of iron parameters (ferritin,
hepcidin, transferrin) and amino acids (phenylalanine, tyrosine)
at FU2 compared to patients with restricted ability to work.
Persistent symptoms at FU2 were tendentially associated with
IFN-γ related parameters. Women were affected by
long-term symptoms more frequently. Conclusively,
inflammation-mediated biochemical changes appear to be related
to symptoms of patients with acute and Long Covid.
Snapkow, Igor; Smith, Nicola M; Arnesdotter, Emma; Beekmann, Karsten; Blanc, Etienne B; Braeuning, Albert; Corsini, Emanuela; Dolenc, Marija Sollner; Duivenvoorde, Loes P M; Eriksen, Gunnar Sundstøl; Franko, Nina; Galbiati, Valentina; Gostner, Johanna M; Grova, Nathalie; Gutleb, Arno C; Hargitai, Rita; Janssen, Aafke W F; Krapf, Solveig A; Lindeman, Birgitte; Lumniczky, Katalin; Maddalon, Ambra; Mollerup, Steen; Parráková, Lucia; Pierzchalski, Arkadiusz; Pieters, Raymond H H; Silva, Maria J; Solhaug, Anita; Staal, Yvonne C M; Straumfors, Anne; Szatmári, Tünde; Turner, Jonathan D; Vandebriel, Rob J; Zenclussen, Ana Claudia; Barouki, Robert
New approach methodologies to enhance human health risk assessment of immunotoxic properties of chemicals - a PARC (Partnership for the Assessment of Risk from Chemicals) project Journal Article
In: Front. Toxicol., vol. 6, pp. 1339104, 2024.
@article{Snapkow2024-eo,
title = {New approach methodologies to enhance human health risk
assessment of immunotoxic properties of chemicals - a PARC
(Partnership for the Assessment of Risk from Chemicals) project},
author = {Igor Snapkow and Nicola M Smith and Emma Arnesdotter and Karsten Beekmann and Etienne B Blanc and Albert Braeuning and Emanuela Corsini and Marija Sollner Dolenc and Loes P M Duivenvoorde and Gunnar Sundstøl Eriksen and Nina Franko and Valentina Galbiati and Johanna M Gostner and Nathalie Grova and Arno C Gutleb and Rita Hargitai and Aafke W F Janssen and Solveig A Krapf and Birgitte Lindeman and Katalin Lumniczky and Ambra Maddalon and Steen Mollerup and Lucia Parráková and Arkadiusz Pierzchalski and Raymond H H Pieters and Maria J Silva and Anita Solhaug and Yvonne C M Staal and Anne Straumfors and Tünde Szatmári and Jonathan D Turner and Rob J Vandebriel and Ana Claudia Zenclussen and Robert Barouki},
year = {2024},
date = {2024-04-01},
journal = {Front. Toxicol.},
volume = {6},
pages = {1339104},
abstract = {As a complex system governing and interconnecting numerous
functions within the human body, the immune system is
unsurprisingly susceptible to the impact of toxic chemicals.
Toxicants can influence the immune system through a multitude of
mechanisms, resulting in immunosuppression, hypersensitivity,
increased risk of autoimmune diseases and cancer development. At
present, the regulatory assessment of the immunotoxicity of
chemicals relies heavily on rodent models and a limited number of
Organisation for Economic Co-operation and Development (OECD)
test guidelines, which only capture a fraction of potential toxic
properties. Due to this limitation, various authorities,
including the World Health Organization and the European Food
Safety Authority have highlighted the need for the development of
novel approaches without the use of animals for immunotoxicity
testing of chemicals. In this paper, we present a concise
overview of ongoing efforts dedicated to developing and
standardizing methodologies for a comprehensive characterization
of the immunotoxic effects of chemicals, which are performed
under the EU-funded Partnership for the Assessment of Risk from
Chemicals (PARC).},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
functions within the human body, the immune system is
unsurprisingly susceptible to the impact of toxic chemicals.
Toxicants can influence the immune system through a multitude of
mechanisms, resulting in immunosuppression, hypersensitivity,
increased risk of autoimmune diseases and cancer development. At
present, the regulatory assessment of the immunotoxicity of
chemicals relies heavily on rodent models and a limited number of
Organisation for Economic Co-operation and Development (OECD)
test guidelines, which only capture a fraction of potential toxic
properties. Due to this limitation, various authorities,
including the World Health Organization and the European Food
Safety Authority have highlighted the need for the development of
novel approaches without the use of animals for immunotoxicity
testing of chemicals. In this paper, we present a concise
overview of ongoing efforts dedicated to developing and
standardizing methodologies for a comprehensive characterization
of the immunotoxic effects of chemicals, which are performed
under the EU-funded Partnership for the Assessment of Risk from
Chemicals (PARC).
Netzer, Nikolaus C; Jaekel, Heidelinde; Popp, Roland; Gostner, Johanna M; Decker, Michael; Eisendle, Frederik; Turner, Rachel; Netzer, Petra; Patzelt, Carsten; Steurer, Christian; Cavalli, Marco; Forstner, Florian; Pramsohler, Stephan; Group, Hypoxiflight Study
Oxidative stress reaction to hypobaric-hyperoxic civilian flight conditions Journal Article
In: Biomolecules, vol. 14, no. 4, 2024.
@article{Netzer2024-xq,
title = {Oxidative stress reaction to hypobaric-hyperoxic civilian flight
conditions},
author = {Nikolaus C Netzer and Heidelinde Jaekel and Roland Popp and Johanna M Gostner and Michael Decker and Frederik Eisendle and Rachel Turner and Petra Netzer and Carsten Patzelt and Christian Steurer and Marco Cavalli and Florian Forstner and Stephan Pramsohler and Hypoxiflight Study Group},
year = {2024},
date = {2024-04-01},
journal = {Biomolecules},
volume = {14},
number = {4},
abstract = {BACKGROUND: In military flight operations, during flights,
fighter pilots constantly work under hyperoxic breathing
conditions with supplemental oxygen in varying hypobaric
environments. These conditions are suspected to cause oxidative
stress to neuronal organ tissues. For civilian flight operations,
the Federal Aviation Administration (FAA) also recommends
supplemental oxygen for flying under hypobaric conditions
equivalent to higher than 3048 m altitude, and has made it
mandatory for conditions equivalent to more than 3657 m altitude.
AIM: We hypothesized that hypobaric-hyperoxic civilian commercial
and private flight conditions with supplemental oxygen in a
flight simulation in a hypobaric chamber at 2500 m and 4500 m
equivalent altitude would cause significant oxidative stress in
healthy individuals. METHODS: Twelve healthy, COVID-19-vaccinated
(third portion of vaccination 15 months before study onset)
subjects (six male, six female, mean age 35.7 years) from a
larger cohort were selected to perform a 3 h flight simulation in
a hypobaric chamber with increasing supplemental oxygen levels
(35%, 50%, 60%, and 100% fraction of inspired oxygen, FiO2,
via venturi valve-equipped face mask), switching back and forth
between simulated altitudes of 2500 m and 4500 m. Arterial blood
pressure and oxygen saturation were constantly measured via
radial catheter and blood samples for blood gases taken from the
catheter at each altitude and oxygen level. Additional blood
samples from the arterial catheter at baseline and 60% oxygen at
both altitudes were centrifuged inside the chamber and the serum
was frozen instantly at -21 °C for later analysis of the
oxidative stress markers malondialdehyde low-density lipoprotein
(M-LDL) and glutathione-peroxidase 1 (GPX1) via the ELISA test.
RESULTS: Eleven subjects finished the study without adverse
events. Whereas the partial pressure of oxygen (PO2) levels
increased in the mean with increasing oxygen levels from baseline
96.2 mm mercury (mmHg) to 160.9 mmHg at 2500 m altitude and 60%
FiO2 and 113.2 mmHg at 4500 m altitude and 60% FiO2, there was
no significant increase in both oxidative markers from baseline
to 60% FiO2 at these simulated altitudes. Some individuals had a
slight increase, whereas some showed no increase at all or even a
slight decrease. A moderate correlation (Pearson correlation
coefficient 0.55) existed between subject age and glutathione
peroxidase levels at 60% FiO2 at 4500 m altitude. CONCLUSION:
Supplemental oxygen of 60% FiO2 in a flight simulation, compared
to flying in cabin pressure levels equivalent to 2500 m-4500 m
altitude, does not lead to a significant increase or decrease in
the oxidative stress markers M-LDL and GPX1 in the serum of
arterial blood.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
fighter pilots constantly work under hyperoxic breathing
conditions with supplemental oxygen in varying hypobaric
environments. These conditions are suspected to cause oxidative
stress to neuronal organ tissues. For civilian flight operations,
the Federal Aviation Administration (FAA) also recommends
supplemental oxygen for flying under hypobaric conditions
equivalent to higher than 3048 m altitude, and has made it
mandatory for conditions equivalent to more than 3657 m altitude.
AIM: We hypothesized that hypobaric-hyperoxic civilian commercial
and private flight conditions with supplemental oxygen in a
flight simulation in a hypobaric chamber at 2500 m and 4500 m
equivalent altitude would cause significant oxidative stress in
healthy individuals. METHODS: Twelve healthy, COVID-19-vaccinated
(third portion of vaccination 15 months before study onset)
subjects (six male, six female, mean age 35.7 years) from a
larger cohort were selected to perform a 3 h flight simulation in
a hypobaric chamber with increasing supplemental oxygen levels
(35%, 50%, 60%, and 100% fraction of inspired oxygen, FiO2,
via venturi valve-equipped face mask), switching back and forth
between simulated altitudes of 2500 m and 4500 m. Arterial blood
pressure and oxygen saturation were constantly measured via
radial catheter and blood samples for blood gases taken from the
catheter at each altitude and oxygen level. Additional blood
samples from the arterial catheter at baseline and 60% oxygen at
both altitudes were centrifuged inside the chamber and the serum
was frozen instantly at -21 °C for later analysis of the
oxidative stress markers malondialdehyde low-density lipoprotein
(M-LDL) and glutathione-peroxidase 1 (GPX1) via the ELISA test.
RESULTS: Eleven subjects finished the study without adverse
events. Whereas the partial pressure of oxygen (PO2) levels
increased in the mean with increasing oxygen levels from baseline
96.2 mm mercury (mmHg) to 160.9 mmHg at 2500 m altitude and 60%
FiO2 and 113.2 mmHg at 4500 m altitude and 60% FiO2, there was
no significant increase in both oxidative markers from baseline
to 60% FiO2 at these simulated altitudes. Some individuals had a
slight increase, whereas some showed no increase at all or even a
slight decrease. A moderate correlation (Pearson correlation
coefficient 0.55) existed between subject age and glutathione
peroxidase levels at 60% FiO2 at 4500 m altitude. CONCLUSION:
Supplemental oxygen of 60% FiO2 in a flight simulation, compared
to flying in cabin pressure levels equivalent to 2500 m-4500 m
altitude, does not lead to a significant increase or decrease in
the oxidative stress markers M-LDL and GPX1 in the serum of
arterial blood.
Jaylet, Thomas; Coustillet, Thibaut; Smith, Nicola M; Viviani, Barbara; Lindeman, Birgitte; Vergauwen, Lucia; Myhre, Oddvar; Yarar, Nurettin; Gostner, Johanna M; Monfort-Lanzas, Pablo; Jornod, Florence; Holbech, Henrik; Coumoul, Xavier; Sarigiannis, Dimosthenis A; Antczak, Philipp; Bal-Price, Anna; Fritsche, Ellen; Kuchovska, Eliska; Stratidakis, Antonios K; Barouki, Robert; Kim, Min Ji; Taboureau, Olivier; Wojewodzic, Marcin W; Knapen, Dries; Audouze, Karine
Comprehensive mapping of the AOP-Wiki database: identifying biological and disease gaps Journal Article
In: Front. Toxicol., vol. 6, pp. 1285768, 2024.
@article{Jaylet2024-rc,
title = {Comprehensive mapping of the AOP-Wiki database: identifying
biological and disease gaps},
author = {Thomas Jaylet and Thibaut Coustillet and Nicola M Smith and Barbara Viviani and Birgitte Lindeman and Lucia Vergauwen and Oddvar Myhre and Nurettin Yarar and Johanna M Gostner and Pablo Monfort-Lanzas and Florence Jornod and Henrik Holbech and Xavier Coumoul and Dimosthenis A Sarigiannis and Philipp Antczak and Anna Bal-Price and Ellen Fritsche and Eliska Kuchovska and Antonios K Stratidakis and Robert Barouki and Min Ji Kim and Olivier Taboureau and Marcin W Wojewodzic and Dries Knapen and Karine Audouze},
year = {2024},
date = {2024-03-01},
journal = {Front. Toxicol.},
volume = {6},
pages = {1285768},
publisher = {Frontiers Media SA},
abstract = {Introduction: The Adverse Outcome Pathway (AOP) concept
facilitates rapid hazard assessment for human health risks. AOPs
are constantly evolving, their number is growing, and they are
referenced in the AOP-Wiki database, which is supported by the
OECD. Here, we present a study that aims at identifying
well-defined biological areas, as well as gaps within the
AOP-Wiki for future research needs. It does not intend to
provide a systematic and comprehensive summary of the available
literature on AOPs but summarizes and maps biological knowledge
and diseases represented by the already developed AOPs (with
OECD endorsed status or under validation). Methods: Knowledge
from the AOP-Wiki database were extracted and prepared for
analysis using a multi-step procedure. An automatic mapping of
the existing information on AOPs (i.e., genes/proteins and
diseases) was performed using bioinformatics tools (i.e.,
overrepresentation analysis using Gene Ontology and DisGeNET),
allowing both the classification of AOPs and the development of
AOP networks (AOPN). Results: AOPs related to diseases of the
genitourinary system, neoplasms and developmental anomalies are
the most frequently investigated on the AOP-Wiki. An evaluation
of the three priority cases (i.e., immunotoxicity and
non-genotoxic carcinogenesis, endocrine and metabolic
disruption, and developmental and adult neurotoxicity) of the
EU-funded PARC project (Partnership for the Risk Assessment of
Chemicals) are presented. These were used to highlight under-
and over-represented adverse outcomes and to identify and
prioritize gaps for further research. Discussion: These results
contribute to a more comprehensive understanding of the adverse
effects associated with the molecular events in AOPs, and aid in
refining risk assessment for stressors and mitigation
strategies. Moreover, the FAIRness (i.e., data which meets
principles of findability, accessibility, interoperability, and
reusability (FAIR)) of the AOPs appears to be an important
consideration for further development.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
facilitates rapid hazard assessment for human health risks. AOPs
are constantly evolving, their number is growing, and they are
referenced in the AOP-Wiki database, which is supported by the
OECD. Here, we present a study that aims at identifying
well-defined biological areas, as well as gaps within the
AOP-Wiki for future research needs. It does not intend to
provide a systematic and comprehensive summary of the available
literature on AOPs but summarizes and maps biological knowledge
and diseases represented by the already developed AOPs (with
OECD endorsed status or under validation). Methods: Knowledge
from the AOP-Wiki database were extracted and prepared for
analysis using a multi-step procedure. An automatic mapping of
the existing information on AOPs (i.e., genes/proteins and
diseases) was performed using bioinformatics tools (i.e.,
overrepresentation analysis using Gene Ontology and DisGeNET),
allowing both the classification of AOPs and the development of
AOP networks (AOPN). Results: AOPs related to diseases of the
genitourinary system, neoplasms and developmental anomalies are
the most frequently investigated on the AOP-Wiki. An evaluation
of the three priority cases (i.e., immunotoxicity and
non-genotoxic carcinogenesis, endocrine and metabolic
disruption, and developmental and adult neurotoxicity) of the
EU-funded PARC project (Partnership for the Risk Assessment of
Chemicals) are presented. These were used to highlight under-
and over-represented adverse outcomes and to identify and
prioritize gaps for further research. Discussion: These results
contribute to a more comprehensive understanding of the adverse
effects associated with the molecular events in AOPs, and aid in
refining risk assessment for stressors and mitigation
strategies. Moreover, the FAIRness (i.e., data which meets
principles of findability, accessibility, interoperability, and
reusability (FAIR)) of the AOPs appears to be an important
consideration for further development.
Mohyuddin, Hira; Laffon, Blanca; Teixeira, João P; Costa, Solange; Teixeira-Gomes, Armanda; Pásaro, Eduardo; Constantine, Niel; Dagdag, Aline; Ortmeyer, Heidi K; Tizenberg, Boris; Afram, Liubov; Yen, Poyu; Marano, Christopher; Lowry, Christopher A; Hoisington, Andrew J; RachBeisel, Jill A; Valdiglesias, Vanessa; Lema-Arranz, Carlota; Fernández-Bertólez, Natalia; Maseda, Ana; Millán-Calenti, José C; Kovacs, Elizabeth J; Gostner, Johanna M; Fuchs, Dietmar; Brenner, Lisa A; Lorenzo-López, Laura; Postolache, Teodor T
Toxoplasma gondii IgG serointensity is positively associated with frailty Journal Article
In: J. Gerontol. A Biol. Sci. Med. Sci., vol. 79, no. 3, 2024.
@article{Mohyuddin2024-pp,
title = {Toxoplasma gondii IgG serointensity is positively associated
with frailty},
author = {Hira Mohyuddin and Blanca Laffon and João P Teixeira and Solange Costa and Armanda Teixeira-Gomes and Eduardo Pásaro and Niel Constantine and Aline Dagdag and Heidi K Ortmeyer and Boris Tizenberg and Liubov Afram and Poyu Yen and Christopher Marano and Christopher A Lowry and Andrew J Hoisington and Jill A RachBeisel and Vanessa Valdiglesias and Carlota Lema-Arranz and Natalia Fernández-Bertólez and Ana Maseda and José C Millán-Calenti and Elizabeth J Kovacs and Johanna M Gostner and Dietmar Fuchs and Lisa A Brenner and Laura Lorenzo-López and Teodor T Postolache},
year = {2024},
date = {2024-03-01},
journal = {J. Gerontol. A Biol. Sci. Med. Sci.},
volume = {79},
number = {3},
publisher = {Oxford University Press (OUP)},
abstract = {BACKGROUND: Persistent inflammation related to aging
(``inflammaging'') is exacerbated by chronic infections and
contributes to frailty in older adults. We hypothesized
associations between Toxoplasma gondii (T. gondii), a common
parasite causing an oligosymptomatic unremitting infection, and
frailty, and secondarily between T. gondii and previously
reported markers of immune activation in frailty. METHODS: We
analyzed available demographic, social, and clinical data in Spanish and Portuguese older adults [N = 601; age: mean (SD)
77.3 (8.0); 61% women]. Plasma T. gondii immunoglobulin G (IgG)
serointensity was measured with an enzyme-linked immunosorbent
assay. The Fried criteria were used to define frailty status.
Validated translations of Mini-Mental State Examination,
Geriatric Depression Scale, and the Charlson Comorbidity Index
were used to evaluate confounders. Previously analyzed
biomarkers that were significantly associated with frailty in
both prior reports and the current study, and also related to T.
gondii serointensity, were further accounted for in
multivariable logistic models with frailty as outcome. RESULTS:
In T. gondii-seropositives, there was a significant positive
association between T. gondii IgG serointensity and frailty, accounting for age (p = .0002), and resisting adjustment for
multiple successive confounders. Among biomarkers linked with
frailty, kynurenine/tryptophan and soluble tumor necrosis factor
receptor II were positively associated with T. gondii
serointensity in seropositives (p < .05). Associations with
other biomarkers were not significant. CONCLUSIONS: This first
reported association between T. gondii and frailty is limited by
a cross-sectional design and warrants replication. While certain
biomarkers of inflammaging were associated with both T. gondii
IgG serointensity and frailty, they did not fully mediate the T.
gondii-frailty association.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
(``inflammaging'') is exacerbated by chronic infections and
contributes to frailty in older adults. We hypothesized
associations between Toxoplasma gondii (T. gondii), a common
parasite causing an oligosymptomatic unremitting infection, and
frailty, and secondarily between T. gondii and previously
reported markers of immune activation in frailty. METHODS: We
analyzed available demographic, social, and clinical data in Spanish and Portuguese older adults [N = 601; age: mean (SD)
77.3 (8.0); 61% women]. Plasma T. gondii immunoglobulin G (IgG)
serointensity was measured with an enzyme-linked immunosorbent
assay. The Fried criteria were used to define frailty status.
Validated translations of Mini-Mental State Examination,
Geriatric Depression Scale, and the Charlson Comorbidity Index
were used to evaluate confounders. Previously analyzed
biomarkers that were significantly associated with frailty in
both prior reports and the current study, and also related to T.
gondii serointensity, were further accounted for in
multivariable logistic models with frailty as outcome. RESULTS:
In T. gondii-seropositives, there was a significant positive
association between T. gondii IgG serointensity and frailty, accounting for age (p = .0002), and resisting adjustment for
multiple successive confounders. Among biomarkers linked with
frailty, kynurenine/tryptophan and soluble tumor necrosis factor
receptor II were positively associated with T. gondii
serointensity in seropositives (p < .05). Associations with
other biomarkers were not significant. CONCLUSIONS: This first
reported association between T. gondii and frailty is limited by
a cross-sectional design and warrants replication. While certain
biomarkers of inflammaging were associated with both T. gondii
IgG serointensity and frailty, they did not fully mediate the T.
gondii-frailty association.